Elements

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This is the complete list of currently classified elements in our database.
1Cer5HmGINO2 with 45ntTIRsRetroSor1
17.6Cer6HmGINO3Retrofit
1731Cer7HopscotchRetrosat-2
2CerebaHsCGIN1 mRNARnGIN1 mRNA
297CfCGIN1 mRNAHsGIN1 mRNARoo
4CfGIN1 mRNAHsKRBA2RpGINGER2a
412CfKRBA2HsSCAND3RpGINGER2b
ACfSCAND3HumnumRuFDV
ASSBSVCft-1Hydra1-1S
AcGIN1 genomic with intronsCgFOB1 partial mRNAHydra1-2SA-OMVV
AcGIN2 ESTCgretHydra2-1SERV
AcGINGER1-1 Repbaseaccession Ginger1-1 AC with 138ntTIRsChKRBA2Hydra3-1SFV-1
AgFOB1ChSCAND3ISIRE1-4
Amn-ichiCiCIN1ISAfSIVAGM
Amn-niCiGIN2 mRNAISEcSIVMAC
Amn-sanCico1ISLaSIVMND
ApBIN1aCigr-1ISScSMRV-H
ApBIN1bCinful-1ISTv1SPM
ApBIN1cCirceISTv2 mRNASRV-1
ApBIN1dCmYLCVISTv3 mRNASTcLV2PP1664
ApBIN1eCoDi2.4IdefixSURL
ApBIN1fCoDi3.1Ifg7SVBV
ApBIN1gCoDi4.1JSaci-6
ApBIN1hCoDi4.3JSRVSbCMV
ApBIN1jCoDi4.4KScBIMV
ApBIN1kCoDi4.5K-HERVScFOB1
ApBIN1lCoDi5.1KTSVSinbad
ApBIN1mCoDi5.2KabukiSkipper
ApBIN1nCoDi5.3KoRVSkippy
ApBIN1oCoDi5.4KoalaSmCIN1 Repbaseaccession Polinton-1 SM with intron
ApBIN1pCoDi5.5KobelSnRV
ApCIN1aCoDi5.6KocoSpCIN1
ApCIN1bCoDi6.1LSpirobel
ApCIN1cCoDi6.2LLDAVSpringer
ApCIN1dCoDi6.3LPDVSsGIN1 mRNA
ApCIN1eCoDi6.4LaKRBA2SsSCAND3
ApCIN1fCoDi6.5LaSCAND3Sto-4
ApCIN1jCoDi6.6LaSCAND3-2Sushi-ichi
ApCIN1nCoDi6.7LaSCAND3-3Suzu
ApCIN1qCoDi7.1LegolasT
ApGIN3aComYMVLsGINGER2-1 Repbaseaccession Ginger2-1 LSTF1
ApGIN3bCopiaLtFOB1 mRNATF2
ApGIN3cCsGIN2 genomic with intronsMTSI-9
ApGIN4aCsRN1MGLR3TVCV
ApGIN4bCubelMMTVTaBV
ApGIN4cCyclops-2MPMVTamy
ApGIN4dDMabelTas
ApGIN4eDBVMagTat4-1
ApGIN4fDRMMaggyTcCIN1
ApGIN5aDane-1MaxTcGINGER2
ApGIN5bDelMbCIN1Tdh2
ApGIN5cDiasporaMdEVTed
ApGIN5eDnKRBA2MdGIN1 mRNATft2
ApGIN5fDnSCAND3Mdg1TgGIN1 mRNA
ApGIN6aDpCIN1Mdg3TgGIN2 mRNA
ApGIN6bDrCIN1MeGIN2 genomic with intronsTkm1
ApGIN6cDrFV-1MeSCAND3Tma
ApGIN7aDrGIN2-1 mRNAMelmothTnt-1
ApGIN7bDrGIN2-2 ESTMfGIN1 mRNATntom1
ApGIN7cDrMVMgGINGER2 ORF with no TIRsToRTL1
ApGIN7dEMiMVTom
ApGINGER1aEFVMicropiaTor1
ApGINGER1bEIAVMmCGIN1 mRNATor2
ApGINGER1cEVCVMmGIN1 mRNATor4a
ApGINGER1dEcCGIN1 mRNAMonkeyTork4
ApGINGER1eEcGIN1 mRNAMooseTribel
ApGINGER1fEcKRBA2MtangaTricopia
ApGINGER2aEcSCAND3MuERV-LTsGINGER2
ApGINGER2bEndovir1-1MuLVTse1
ApGINGER2fFNTse3
AracoFFVNabelTtKRBA2
Athila4-1FIVNinjaTtSCAND3
BFMVNomadTto1
B1147A04.5FcKRBA2NvCIN1Tv1
BAEVMFcSCAND3NvGINGER2-1 Repbaseaccession Ginger2-1 NVTy1B
BFVFeLVNvGINGER2-2 Repbaseaccession Ginger2-2 NVTy2
BIVFourfNveCIN1-1 Repbaseaccession Polinton-N1 NVTy3-1
BLVFrGIN2 genomic with intronsNveCIN1-2Ty4
BRRVGOU
BSGFVG-RhodoOaGIN1 mRNAUlysses
BSMyVGaGIN2 genomic with intronsOcKRBA2V
BSOLVGaLVOcSCAND3V12
BSVAVGabelOgGIN1VMV
Bagy-1GalEa1OgreVitico1-1
Bagy-2GaladrielOlco1Vitico1-2
BatataGfCIN1OnGIN2 ESTW
Beetle1GgGIN1 mRNAOpie-2WdSV
BelGgGIN2 mRNAOryco1-1Woot
BfGINGER1-1 with79ntTIRsGiCIN1Oryco1-2X
BfGINGER2-1 Repbaseaccession Ginger2-1 BFGimliOsserXEN1
BlastopiaGloinOsvaldoXanthias
BmGINGER2a with 37nt TIRsGmr1PXlGIN2 mRNA
BmGINGER2bGrande1-4PCSVXmCIN1
BoudiccaGrasshopperPERV-MSLXtCIN1
BsCVBVGulliverPVCVXtGIN2
BtCGIN1 mRNAGypsyPaGIN1 mRNAY
BtGIN1 mRNAGypsyvirPaoYokozuna
BtKRBA2HPeabodyYoyo
BtSCAND3HERV-EPocoZ
BurdockHERV-K10PurbelZFERV
CHFVPvKRBA2ZFERV-2
CAEVHIV-1PvSCAND3Zam
CERVHIV-2PyERVZebel
CFG1HMS-BeaglePyRE1G1Zeco1
CLNVHTLV-1PyggyZeco2
CRMHTLV-2PyretZrFOB1
CSSVHmCIN1RM
CSVMVHmGINA1RCHO-K1marY1
CYMVHmGINA2REM1P
CaMVHmGINA3REVpCal
CalypsoHmGINA4RIRE2pCretro3
CbCIN1HmGINA5RSVpCretro6
CcCIN1HmGINGER1 mRNARTBVR
Cer1HmGINGER1-3 with136ntTIRsRTVL-IarGmr1
Cer10-1HmGINGER2-1 Repbaseaccession Ginger2-1 HMRTvr2
Cer2HmGINNY1RcGIN2 EST
Cer3HmGINNY2Real
Cer4HmGINO1Reina




Welcome to the Gypsy Database (GyDB) an open editable database about the evolutionary relationship of viruses, mobile genetic elements (MGEs) and the genomic repeats where we invite all authors to contribute with their knowledge to improve and expand the topics.
Cite this project:

Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J. Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., LaTorre, A., Moya, A. (2011) The Gypsy Database (GyDB) of Mobile Genetic Elements: Release 2.0 Nucleic Acids Research (NARESE) 39 (suppl 1): D70-D74 doi: 10.1093/nar/gkq1061

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