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Page title matches

  • Element:HIV-1
    {{Element
    4 KB (488 words) - 09:22, 3 May 2010
  • Element:HIV-2
    {{Element
    2 KB (297 words) - 09:11, 3 May 2010
  • Element:HMS-Beagle
    {{Element ...le'' is 7 Kb in size including LTRs of 266 nt. The internal region of this element displays a Primer Binding Site for a tRNA<sup>Lys</sup>, two ORFs for ''gag
    1 KB (174 words) - 08:52, 29 April 2010
  • Element:HTLV-1
    {{Element
    3 KB (355 words) - 11:55, 7 September 2010
  • Element:HTLV-2
    {{Element
    2 KB (320 words) - 08:46, 3 May 2010
  • Element:MuERV-L
    {{Element ...[[Literature:5609|Benit ''et al.'' 1997]]; [[Literature:5608|1999]]). This element belongs to the group of ERV-L elements, and its genomic structure is 6.5 Kb
    1 KB (138 words) - 08:48, 4 May 2010
  • Element:PERV-MSL
    {{Element
    1 KB (184 words) - 08:36, 4 May 2010
  • Element:RCHO-K1
    {{Element ...recognizes a target G-repeat sequence belonging to the short interspersed element family of retroposons. This retrovirus has been detected in CHO-K1 cells an
    1 KB (165 words) - 08:42, 4 May 2010
  • Element:Retrosat-2
    {{Element ...adjacent to the 3&acute;LTR ([[Literature:85490|Llaca et al 1998]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (245 words) - 16:50, 11 November 2009
  • Element:RTVL-Ia
    {{Element |description=Three ''Retrovirus-like Element-Isoleucine'' (RTVL-I) sequences were characterized inserted in the ''haptog
    2 KB (263 words) - 08:23, 4 May 2010
  • Element:SA-OMVV
    {{Element
    2 KB (227 words) - 15:41, 3 May 2010
  • Element:SFV-1
    {{Element
    2 KB (273 words) - 08:57, 4 May 2010
  • Element:SMRV-H
    {{Element
    2 KB (320 words) - 15:17, 3 May 2010
  • Element:SRV-1
    {{Element
    2 KB (332 words) - 15:16, 3 May 2010
  • Element:Sushi-ichi
    {{Element ...:10125|Butler et al. 2001]]; [[Literature:80623|Volff et al. 2003]]). This element presents a detectable chromodomain at the C-terminal end of the integrase p
    2 KB (258 words) - 16:04, 11 November 2009
  • Element:Tat4-1
    {{Element ...nce close to the SAM1 gene ([[Literature:85442|Peleman et al.1991]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of ot
    1 KB (199 words) - 18:27, 10 November 2009
  • Element:Ty3-1
    {{Element ...e is 5.5 Kb in size, including LTRs of 339 nt. The internal region of this element displays a Primer Binding Site (PBS), two Open Reading Frames (ORFs) for ''
    2 KB (341 words) - 14:02, 28 January 2010
  • Element:Amn-ni
    {{Element ...'Danio rerio'' Zebrafish ([[Literature:100596|Llorens et al. 2009]]). This element belongs to V-clade ([[Literature:100596|Llorens et al. 2009]]) the chromovi
    2 KB (242 words) - 12:02, 2 December 2009
  • Element:Hydra2-1
    {{Element ...M is 4.8 Kb in size including LTRs of 0.22 kb. The internal region of this element displays a Primer Binding Site (PBS), a single Open Reading Frame (ORF) tha
    1 KB (176 words) - 16:06, 19 January 2010
  • Element:Hydra3-1
    {{Element ...dra magnipapillata'' ([[Literature:100596|Llorens ''et al.'' 2009]]). This element belongs to the ''Tas'' clade ([[Literature:14755|Copeland ''et al.'' 2005]]
    1 KB (175 words) - 17:49, 16 December 2009
  • Element:Hydra1-2
    {{Element [[Category:Element]]
    1 KB (176 words) - 14:42, 14 January 2010
  • Element:Hydra1-1
    {{Element [[Category:Element]]
    1 KB (173 words) - 14:53, 14 January 2010
  • Element:Vitico1-2
    {{Element ...TRs of 299 (5’LTR) and 295 nts long (3’LTR). The complete sequence of this element corresponds to the ''Vitis vinifera'' genome region included between the nu
    1 KB (191 words) - 10:25, 15 January 2010
  • Element:Oryco1-2
    {{Element |description=''Oryco1-2'' (''Oryza Copia'' element type 1-2) is an ''Oryco''-like ''Ty1/Copia''-like LTR retrotransposon descr
    934 bytes (128 words) - 15:24, 19 January 2010
  • Element:Oryco1-1
    {{Element |description=''Oryco1-1'' (''Oryco'' ''Copia'' element type 1-1) is a ''Ty1/Copia''-like LTR retrotransposon found in the genome o
    1 KB (165 words) - 15:31, 19 January 2010
  • Element:Vitico1-1
    {{Element ...LTRs of 302 (5’LTR) and 301 nts long (3’LTR). The internal region of this element presents a single ORF displaying the distinct gag and pol domains in the OR
    1,014 bytes (139 words) - 15:22, 19 January 2010
  • Element:DrFV-1
    {{Element ...w see [[Literature:49494|Meiering and Linial 2001]]). The presence of this element in ''Danio rerio'' suggests that spumaretroviruses are more widely distribu
    2 KB (288 words) - 08:54, 4 May 2010
  • Element:Amn-san
    {{Element ...trotransposon characterized in the ''Xenopus (Silurana) tropicalis''. This element belongs to V-clade ([[Literature:100596|Llorens et al. 2009]]) the chromovi
    2 KB (248 words) - 19:13, 15 June 2020
  • Element:K-HERV
    {{Element In particular, the human endogenous retrovirus K50D (K-HERV) is an element originally isolated from human species ([[Literature:42059|Lavie ''et al.''
    2 KB (290 words) - 16:34, 6 May 2011
  • Element:ZFERV-2
    {{Element ...us retrovirus'' from clone DKEY-26I24 (ZFERV-2) is counterpart of the ZERV element originally isolated from Zebrafish (''Danio rerio'') species ([[Literature:
    2 KB (246 words) - 08:07, 4 May 2010
  • Element:G-Rhodo
    {{Element [[Category:Element]]
    2 KB (196 words) - 14:27, 13 January 2010
  • Element:Sto-4
    {{Element ...998]]). According to ([[Literature:100596|Llorens ''et al''. 2009]]), this element belongs to ''Tork'' clade within Branch 2 of the ''Ty1/Copia'' LTR retrotra
    1 KB (195 words) - 12:27, 19 January 2010
  • Element:Tnt-1
    {{Element |description=''Tnt1'' was the first ''Ty1/Copia'' transposable element found in ''Nicotiana tabacum'' ([[Literature:27170|Grandbastien ''et al.''
    1 KB (160 words) - 14:26, 19 January 2010
  • Element:Amn-ichi
    {{Element ...''Anolis carolinensis'' ([[Literature:95833|Piskurek et al. 2008]]). This element belongs to ''V-clade'' ([[Literature:100596|Llorens et al. 2009]]) the chro
    2 KB (238 words) - 10:02, 2 December 2009
  • Element:TSI-9
    {{Element [[Category:Element]]
    2 KB (233 words) - 15:25, 13 January 2010
  • Element:SIRE1-4
    {{Element ...([[Literature:41867|Laten ''et al''. 2003]]). The internal region of this element contains a Primer Binding Site (PBS), complementary to a tRNA<sup>iMet</sup
    2 KB (288 words) - 15:22, 13 January 2010
  • Element:Opie-2
    {{Element ...pol'' domains typical of ''Ty1/Copia'' elements are well preserved in this element. Similarly to other ''Sire'' elements, ''Opie-2'' contains a putative ''env
    2 KB (329 words) - 15:26, 13 January 2010
  • Element:Saci-6
    {{Element ...ng), including LTRs of 78 nt (5´LTR) and 177 nt (3´LTR). It is a truncated element which LTRs flanked a single ORF that encodes for gag and pol polyproteins.
    2 KB (208 words) - 14:08, 11 December 2009
  • Element:Cer10-1
    {{Element ...omains of LTR retrotransposons are clearly evident in the sequence of this element ([[Literature:8238|Bowen and McDonald 1999]]). No information about the Cer
    1 KB (201 words) - 17:46, 16 December 2009
  • Element:Endovir1-1
    {{Element ...mains that exhibit a 24% amino acid identity to ''SIRE-1'' other sirevirus element ([[Literature:59076|Peterson-Burch ''et al.'' 2000]]). In comparison to oth
    2 KB (288 words) - 15:25, 13 January 2010
  • Element:HmGINGER1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:HmGINO2 with 45ntTIRs
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:LaSCAND3-3
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:LaSCAND3-2
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:ISTv2 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:ISTv3 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:LtFOB1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:NveCIN1-2
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:GgGIN2 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:AcGIN2 EST
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:TgGIN2 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:RcGIN2 EST
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:XlGIN2 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:OnGIN2 EST
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:CiGIN2 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:OaGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:MdGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:TgGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:PaGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:MfGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:BtGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:SsGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:EcGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:CfGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:GgGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:HsGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:MmGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:RnGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:BtCGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:CfCGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:EcCGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:HsCGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:MmCGIN1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:HmGINGER1-3 with136ntTIRs
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:BfGINGER1-1 with79ntTIRs
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:CgFOB1 partial mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:DrGIN2-1 mRNA
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:MeGIN2 genomic with introns
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:DrGIN2-2 EST
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:FrGIN2 genomic with introns
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:GaGIN2 genomic with introns
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:CsGIN2 genomic with introns
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:AcGIN1 genomic with introns
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:BmGINGER2a with 37nt TIRs
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:MgGINGER2 ORF with no TIRs
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:NveCIN1-1 Repbaseaccession Polinton-N1 NV
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:SmCIN1 Repbaseaccession Polinton-1 SM with intron
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:AcGINGER1-1 Repbaseaccession Ginger1-1 AC with 138ntTIRs
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:NvGINGER2-1 Repbaseaccession Ginger2-1 NV
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:NvGINGER2-2 Repbaseaccession Ginger2-2 NV
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:HmGINGER2-1 Repbaseaccession Ginger2-1 HM
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:LsGINGER2-1 Repbaseaccession Ginger2-1 LS
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:BfGINGER2-1 Repbaseaccession Ginger2-1 BF
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011

Page text matches

  • Element:Maggy
    {{Element ...djacent to the 3&acute;LTR ([[Literature:21381|Farman et al. 1996]]). This element presents a detectable chromodomain at the C-terminal end of the integrase d
    2 KB (248 words) - 16:27, 11 November 2009
  • Element:Cico1
    {{Element [[Category:Element]]
    1 KB (202 words) - 16:29, 27 January 2010
  • Phylogeny:CHR eukaryote protein domains
    rect 362 93 407 109 [[Element:Legolas|Legolas]] rect 362 113 387 129 [[Element:Tma|Tma]]
    11 KB (1,436 words) - 10:41, 11 May 2010
  • Element:Zeco1
    {{Element [[Category:Element]]
    1 KB (190 words) - 16:27, 27 January 2010
  • Element:Mtanga
    {{Element [[Category:Element]]
    1 KB (185 words) - 10:14, 23 December 2009
  • Element:RIRE2
    {{Element ...a sativa'' ([[Literature:55973|Ohtsubo, Kumekawa and Ohtsubo 1999]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of ot
    1 KB (186 words) - 18:28, 10 November 2009
  • Element:Tamy
    {{Element [[Category:Element]]
    1 KB (177 words) - 14:15, 11 December 2009
  • Element:SURL
    {{Element ...RL is 5.3 Kb in size including LTRs of 254 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>met</sup>,
    1 KB (178 words) - 16:07, 19 January 2010
  • Element:RetroSor1
    {{Element ...data in ''Sorghum bicolor'' ([[Literature:85490|Llaca et al. 1998]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of ot
    1 KB (185 words) - 18:27, 10 November 2009
  • Element:CoDi6.1
    {{Element [[Category:Element]]
    1 KB (190 words) - 18:57, 8 April 2010
  • Element:Olco1
    {{Element [[Category:Element]]
    1 KB (201 words) - 16:28, 27 January 2010
  • Element:REM1
    {{Element ...putative rearrangement and partial loose of the original integrase of this element ([[Literature:100596|Llorens ''et al.'' 2009]]).
    2 KB (277 words) - 19:06, 25 December 2009
  • Element:Circe
    {{Element ...'' is 7.4 Kb in size including LTRs of 240 nt. The internal region of this element displays a Primer Binding Site (PBS) for a tRNA<sup>Lys3</sup>, three Open
    2 KB (220 words) - 18:16, 10 November 2009
  • Element:Sushi-ichi
    {{Element ...:10125|Butler et al. 2001]]; [[Literature:80623|Volff et al. 2003]]). This element presents a detectable chromodomain at the C-terminal end of the integrase p
    2 KB (258 words) - 16:04, 11 November 2009
  • Element:SIRE1-4
    {{Element ...([[Literature:41867|Laten ''et al''. 2003]]). The internal region of this element contains a Primer Binding Site (PBS), complementary to a tRNA<sup>iMet</sup
    2 KB (288 words) - 15:22, 13 January 2010
  • Element:Retrofit
    {{Element [[Category:Element]]
    1 KB (181 words) - 14:30, 18 January 2010
  • Element:ZFERV
    {{Element [[Category:Element]]
    1 KB (195 words) - 08:00, 4 May 2010
  • Element:CoDi6.5
    {{Element [[Category:Element]]
    1 KB (192 words) - 18:59, 8 April 2010
  • Element:CoDi6.7
    {{Element [[Category:Element]]
    1 KB (196 words) - 18:57, 8 April 2010
  • Phylogeny:GPYF LTR retroelements
    rect 312 12 337 28 [[Element:Tor1|Tor1]] rect 312 25 333 41 [[Element:Ted|Ted]]
    8 KB (757 words) - 10:37, 27 November 2009
  • Element:GalEa1
    {{Element [[Category:Element]]
    1 KB (200 words) - 09:23, 11 March 2010
  • Element:Tat4-1
    {{Element ...nce close to the SAM1 gene ([[Literature:85442|Peleman et al.1991]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of ot
    1 KB (199 words) - 18:27, 10 November 2009
  • Element:K-HERV
    {{Element In particular, the human endogenous retrovirus K50D (K-HERV) is an element originally isolated from human species ([[Literature:42059|Lavie ''et al.''
    2 KB (290 words) - 16:34, 6 May 2011
  • Element:Nomad
    {{Element ...rminal end of ''Nomad'', and seems to be the main insertion target of this element ([[Literature:82500|Whalen and Grigliatti 1998]]).
    1 KB (190 words) - 08:54, 29 April 2010
  • Element:Cer6
    {{Element ...'' is 5.1 Kb in size including LTRs of 218 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Ser</sup>,
    1 KB (204 words) - 16:40, 19 January 2010
  • Element:CoDi6.2
    {{Element [[Category:Element]]
    2 KB (204 words) - 19:00, 8 April 2010
  • Element:Cer4
    {{Element ...ure:78091|Tubio, Naveira and Costas 2004]]). The genomic structure of this element is 5.1 Kb in size including LTRs of 165 nt. The internal region displays a
    1 KB (204 words) - 16:37, 19 January 2010
  • Element:Max
    {{Element [[Category:Element]]
    1 KB (202 words) - 17:01, 16 December 2009
  • Element:Gulliver
    {{Element ...' is 4.8 Kb in size including LTRs of 259 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA <sup>Met</sup>
    1 KB (202 words) - 16:35, 19 January 2010
  • Element:rGmr1
    {{Element [[Category:Element]]
    2 KB (204 words) - 00:54, 25 December 2009
  • Element:Cer1
    {{Element ...'' is 8.9 Kb in size including LTRs of 492 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA <sup>Lys</sup>
    1 KB (216 words) - 18:08, 10 November 2009
  • Element:CoDi6.3
    {{Element [[Category:Element]]
    2 KB (207 words) - 19:00, 8 April 2010
  • Element:Cinful-1
    {{Element ...genome of ''Zea mays'' ([[Literature:66254|San Miguel et al. 1998]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of ot
    1 KB (203 words) - 18:27, 10 November 2009
  • Element:Calypso
    {{Element ...o'' is 13 Kb in size including LTRs of 1.8 Kb. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Asp</sup>,
    2 KB (227 words) - 18:24, 10 November 2009
  • Element:G-Rhodo
    {{Element [[Category:Element]]
    2 KB (196 words) - 14:27, 13 January 2010
  • Element:Idefix
    {{Element ...a melanogaster'' called RevI where ''Idefix'' and ''Zam'' (other ''Gypsy'' element) have been associated with a series of mutations affecting eye coloration (
    2 KB (215 words) - 14:53, 3 May 2010
  • Element:Pao
    {{Element [[Category:Element]]
    2 KB (226 words) - 14:15, 11 December 2009
  • Element:SnRV
    {{Element [[Category:Element]]
    2 KB (226 words) - 08:46, 4 May 2010
  • Element:CoDi7.1
    {{Element [[Category:Element]]
    2 KB (221 words) - 16:48, 22 February 2010
  • Element:Diaspora
    {{Element ...h is 11.7 Kb in size including LTRs of 2.5 Kb. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Asp</sup>,
    2 KB (219 words) - 18:25, 10 November 2009
  • Element:Ninja
    {{Element [[Category:Element]]
    2 KB (225 words) - 14:13, 17 December 2009
  • Element:Boudicca
    {{Element [[Category:Element]]
    2 KB (233 words) - 23:32, 28 November 2009
  • Element:Bagy-2
    {{Element ...ong with other retrotransposons in the genome of ''Hordeum vulgare''. This element belongs to ''Athila'' clade, a lineage of possible retroviruses in plants (
    2 KB (232 words) - 18:25, 10 November 2009
  • Element:Tntom1
    {{Element ...adjacent to the 3&acute;LTR ([[Literature:27540|Gregor et al 2004]]). This element presents a detectable chromodomain at the C-terminal end of the integrase d
    2 KB (223 words) - 16:43, 11 November 2009
  • Element:TSI-9
    {{Element [[Category:Element]]
    2 KB (233 words) - 15:25, 13 January 2010
  • Element:CoDi4.4
    {{Element [[Category:Element]]
    2 KB (230 words) - 16:41, 22 February 2010
  • Element:RTVL-Ia
    {{Element |description=Three ''Retrovirus-like Element-Isoleucine'' (RTVL-I) sequences were characterized inserted in the ''haptog
    2 KB (263 words) - 08:23, 4 May 2010
  • Element:Legolas
    {{Element ...e 3' LTR ([[Literature:47259|Mar&iacute;n and Llor&eacute;ns 2000]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (225 words) - 16:48, 11 November 2009
  • Element:Gimli
    {{Element ...cute;LTR ([[Literature:47259|Mar&iacute;n and Llor&eacute;ns 2000]]). This element presents a detectable chromodomain at the C-terminal end of the integrase p
    2 KB (227 words) - 16:46, 11 November 2009
  • Element:CoDi4.1
    {{Element [[Category:Element]]
    2 KB (236 words) - 16:39, 22 February 2010
  • Element:Reina
    {{Element ...jacent to the 3&acute;LTR ([[Literature:3021|Avramova et al. 1996]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (222 words) - 16:47, 11 November 2009
  • Element:ASSBSV
    {{Element [[Category:Element]]
    2 KB (241 words) - 08:04, 4 May 2010
  • Element:marY1
    {{Element ...ent to the 3&acute;LTR ([[Literature:52911|Murata and Yamada 2000]]). This element presents a detectable chromodomain (CHR) at the C-terminal end of the integ
    2 KB (234 words) - 10:14, 22 April 2010
  • Element:Skippy
    {{Element ...cent to the 3&acute;LTR ([[Literature:1643|Anaya and Roncero 1995]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (238 words) - 16:29, 11 November 2009
  • DUTPase
    ...acilliform virus'' ([[element:DBV|DBV]]) and ''Taro bacilliform virus'' ([[element:TaBV|TaBV]])].
    2 KB (250 words) - 10:49, 27 May 2010
  • Element:Ifg7
    {{Element ...ent to the 3&acute;LTR ([[Literature:39614|Kossack and Kinlaw 1999]]).This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (244 words) - 16:46, 11 November 2009
  • Element:Bagy-1
    {{Element ...cent to the 3&acute;LTR ([[Literature:57506|Panstruga et al. 1998]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (231 words) - 16:51, 11 November 2009
  • Element:Cgret
    {{Element ...jacent to the 3&acute;LTR ([[Literature:74712|Zhu y Oudemans 2000]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (250 words) - 16:30, 11 November 2009
  • Element:Ty4
    {{Element [[Category:Element]]
    2 KB (272 words) - 16:35, 27 January 2010
  • Element:Tma
    {{Element ...cent to the 3&acute;LTR ([[Literature:83586|Wright y Voytas 1998]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (245 words) - 16:48, 11 November 2009
  • Element:Beetle1
    {{Element ...7|Gorinsek, Gubensek, and Kordis 2004]]). The genomic structure of of this element is 6.7 Kb in size, including LTRs of 546 nt. The internal region displays a
    2 KB (250 words) - 16:45, 11 November 2009
  • Element:Cigr-1
    {{Element ...'' is 4.2 Kb in size including LTRs of 245 nt. The internal region of this element displays a single Open Reading Frame (ORF) coding for a gag-pol polyprotein
    2 KB (274 words) - 12:23, 18 December 2009
  • Element:TF2
    {{Element ...2 is 4.9 Kb in size, including LTRs of 349 nt. The internal region of this element displays a Primer Binding Site (PBS), a single Open Reading Frame (ORF)'' g
    2 KB (245 words) - 16:40, 11 November 2009
  • Element:Grasshopper
    {{Element ...e 3&acute;LTR ([[Literature:18575|Dobinson, Harris and Hamer 1993]]). This element presents a detectable chromodomain at the C-terminal end of the integrase d
    2 KB (247 words) - 16:35, 11 November 2009
  • Element:Del
    {{Element ...djacent to the 3&acute;LTR ([[Literature:70855|Smyth et al. 1989]]). This element presents a detectable chromodomain at the C-terminal end of the integrase d
    2 KB (258 words) - 16:49, 11 November 2009
  • Element:Pyret
    {{Element ...nt to the 3&acute;LTR ([[Literature:53656|Nakayashiki et al. 2001]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (246 words) - 16:31, 11 November 2009
  • Phylogeny:INT LTR retroelements
    rect 353 12 394 28 [[Element:GalEa1|GalEa1]] rect 353 27 385 43 [[Element:Cico1|Cico1]]
    12 KB (1,053 words) - 09:42, 3 May 2010
  • Element:BLV
    {{Element ...for viral replication and cellular transformation in infected cells (see [[Element:HTLV-1|HTLV-1]] or [[Accessory_Genes|accessory genes]]), and finally, a Pol
    2 KB (260 words) - 15:29, 3 May 2010
  • Element:ToRTL1
    {{Element [[Category:Element]]
    2 KB (281 words) - 15:24, 13 January 2010
  • Element:Cereba
    {{Element ...s of ''Hordeum vulgare'' ([[Literature:60946|Presting et al. 1998]]). This element belongs to the ''Chromoviridae '' branch, term suggested ([[Literature:472
    2 KB (270 words) - 16:44, 11 November 2009
  • Phylogeny:POL LTR retroelements
    rect 383 4004 430 4020 [[Element:Vitico1-2|Vitico1-2]] rect 383 3989 430 4005 [[Element:Melmoth|Melmoth]]
    13 KB (1,181 words) - 14:04, 1 August 2020
  • Element:PVCV
    {{Element ...100596|Llorens ''et al'' 2009]], ''Petuvirus'' genus and consequently PVCV element, although falls more-or-less close to Class 1, constitutes an independent c
    3 KB (482 words) - 13:56, 15 March 2010
  • Element:LLDAV
    {{Element [[Category:Element]]
    2 KB (325 words) - 14:56, 17 March 2010
  • Phylogeny:RT LTR retroelements
    rect 360 12 405 28 [[Element:CoDi5.6|CoDi5.6]] rect 360 25 405 41 [[Element:CoDi5.1|CoDi5.1]]
    13 KB (1,179 words) - 11:21, 4 May 2010
  • Phylogeny:RNaseH LTR retroelements
    rect 398 12 443 28 [[Element:CoDi6.6|CoDi6.6]] rect 398 25 443 41 [[Element:CoDi6.1|CoDi6.1]]
    13 KB (1,182 words) - 08:51, 20 August 2010
  • Element:EFV
    {{Element [[Category:Element]]
    2 KB (326 words) - 09:04, 4 May 2010
  • Phylogeny:AP LTR retroelements
    rect 377 64 408 80 [[Element:Tork4|Tork4]] rect 377 81 406 97 [[Element:Sto-4|Sto-4]]
    14 KB (1,249 words) - 15:23, 17 June 2010
  • Element:Ty3-1
    {{Element ...e is 5.5 Kb in size, including LTRs of 339 nt. The internal region of this element displays a Primer Binding Site (PBS), two Open Reading Frames (ORFs) for ''
    2 KB (341 words) - 14:02, 28 January 2010
  • Element:FFV
    {{Element [[Category:Element]]
    3 KB (348 words) - 09:00, 4 May 2010
  • Element:BFV
    {{Element [[Category:Element]]
    3 KB (351 words) - 09:07, 4 May 2010
  • Element:Gypsy
    {{Element ...1|Marlor, Parkhurst y Corces 1986]]). ''Gypsy'' also displays an insulator element (gypsy insulator) of 350 nt at an untranslated zone of the transcribed 5&ac
    3 KB (332 words) - 14:35, 3 May 2010
  • Element:EVCV
    {{Element [[Category:Element]]
    3 KB (388 words) - 15:28, 17 March 2010
  • Element:CERV
    {{Element [[Category:Element]]
    3 KB (380 words) - 13:43, 31 March 2010
  • Element:BsCVBV
    {{Element [[Category:Element]]
    3 KB (390 words) - 12:32, 15 March 2010
  • Element:RuFDV
    {{Element [[Category:Element]]
    3 KB (395 words) - 10:14, 19 April 2010
  • Element:FMV
    {{Element [[Category:Element]]
    3 KB (394 words) - 14:12, 17 March 2010
  • Phylogeny:INT GIN/GINGER
    rect 309 765 332 781 [[Element:Roo|Roo]] rect 309 781 330 797 [[Element:Max|Max]]
    24 KB (2,624 words) - 08:44, 9 November 2011
  • Element:CLNV
    {{Element [[Category:Element]]
    3 KB (436 words) - 12:13, 15 March 2010
  • Element:MiMV
    {{Element [[Category:Element]]
    3 KB (409 words) - 10:51, 16 March 2010
  • Element:Gypsyvir
    {{Element
    1 KB (160 words) - 08:48, 29 April 2010
  • Element:Tv1
    {{Element
    1 KB (173 words) - 14:51, 3 May 2010
  • Phylogeny: AP clan AA aspartic peptidases
    rect 213 29 240 38 [[Element:Circe|Circe]] rect 212 337 234 344 [[Element:Cft-1|Cft-1]]
    26 KB (3,400 words) - 16:38, 19 November 2009
  • Element:BAEVM
    {{Element
    1 KB (170 words) - 08:38, 4 May 2010
  • Element:SVBV
    {{Element [[Category:Element]]
    3 KB (416 words) - 08:15, 1 April 2010
  • Element:TaBV
    {{Element ...Badna- and Tungroviruses) presents in the COAT ''gag''-like region of this element resembles to those identified in the nucleocapsid domains of LTR retroelem
    5 KB (652 words) - 13:12, 25 May 2010
  • Element:Yoyo
    {{Element
    1 KB (166 words) - 08:53, 29 April 2010
  • Sidebars:Retroelements
    ** Category:Element|Elements
    1 KB (155 words) - 09:53, 7 November 2011
  • Element:LPDV
    {{Element
    1 KB (177 words) - 08:00, 3 May 2010
  • Element:ComYMV
    {{Element [[Category:Element]]
    3 KB (464 words) - 12:44, 22 March 2010
  • Element:HERV-E
    {{Element
    1 KB (174 words) - 08:26, 4 May 2010

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Welcome to the Gypsy Database (GyDB) an open editable database about the evolutionary relationship of viruses, mobile genetic elements (MGEs) and the genomic repeats where we invite all authors to contribute with their knowledge to improve and expand the topics.
Cite this project:

Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J. Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., LaTorre, A., Moya, A. (2011) The Gypsy Database (GyDB) of Mobile Genetic Elements: Release 2.0 Nucleic Acids Research (NARESE) 39 (suppl 1): D70-D74 doi: 10.1093/nar/gkq1061

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