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  • Element:TtKRBA2
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:49, 11 November 2011
  • Element:CfKRBA2
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:49, 11 November 2011
  • Element:CfSCAND3
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:49, 11 November 2011
  • Element:FcSCAND3
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:FcKRBA2
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:TsGINGER2
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:TcGINGER2
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:49, 11 November 2011
  • Element:SsSCAND3
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ISAf
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ISEc
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ISLa
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ISSc
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ISTv1
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:49, 11 November 2011
  • Element:HsSCAND3
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:49, 11 November 2011
  • Element:HsKRBA2
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:49, 11 November 2011
  • Element:BtSCAND3
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:BtKRBA2
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:EcKRBA2
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:EcSCAND3
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:AgFOB1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ScFOB1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ZrFOB1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:49, 11 November 2011
  • Element:ApBIN1g
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1h
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1a
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1b
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1c
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1d
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1e
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1f
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1j
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1k
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1l
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1m
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1n
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1o
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApBIN1p
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN3a
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN3b
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN3c
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN4a
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN4b
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN4c
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN4d
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN4e
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN4f
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN5a
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN5b
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN5c
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN5e
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN5f
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN6a
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN6b
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN6c
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN7a
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN7b
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN7c
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApGIN7d
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:GiCIN1
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:50, 11 November 2011
  • Element:MbCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:CbCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:CiCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:CcCIN1
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:50, 11 November 2011
  • Element:DrCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:DpCIN1
    {{Element [[Category:Element]]
    238 bytes (27 words) - 08:50, 11 November 2011
  • Element:GfCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:HmCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:NvCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:SpCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:TcCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:XtCIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:XmCIN1
    {{Element [[Category:Element]]
    236 bytes (27 words) - 08:50, 11 November 2011
  • Element:ApCIN1a
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1b
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1c
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1d
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1n
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1e
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1f
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1j
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:ApCIN1q
    {{Element [[Category:Element]]
    274 bytes (33 words) - 08:50, 11 November 2011
  • Element:XtGIN2
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:OgGIN1
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:BmGINGER2b
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:ApGINGER2a
    {{Element [[Category:Element]]
    260 bytes (31 words) - 08:50, 11 November 2011
  • Element:ApGINGER2b
    {{Element [[Category:Element]]
    260 bytes (31 words) - 08:50, 11 November 2011
  • Element:ApGINGER2f
    {{Element [[Category:Element]]
    260 bytes (31 words) - 08:50, 11 November 2011
  • Element:RpGINGER2b
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:RpGINGER2a
    {{Element [[Category:Element]]
    240 bytes (27 words) - 08:50, 11 November 2011
  • Element:Athila4-1
    {{Element
    2 KB (208 words) - 18:24, 10 November 2009
  • Element:Bagy-1
    {{Element ...cent to the 3´LTR ([[Literature:57506|Panstruga et al. 1998]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (231 words) - 16:51, 11 November 2009
  • Element:Bagy-2
    {{Element ...ong with other retrotransposons in the genome of ''Hordeum vulgare''. This element belongs to ''Athila'' clade, a lineage of possible retroviruses in plants (
    2 KB (232 words) - 18:25, 10 November 2009
  • Element:Cft-1
    {{Element ...of ''Cladosporium fulvum'' ([[Literature:49102|McHale et al. 1992]]). This element belongs to the ''Chromoviridae'' branch, term suggested ([[Literature:4725
    2 KB (238 words) - 16:28, 11 November 2009
  • Element:Cigr-1
    {{Element ...'' is 4.2 Kb in size including LTRs of 245 nt. The internal region of this element displays a single Open Reading Frame (ORF) coding for a gag-pol polyprotein
    2 KB (274 words) - 12:23, 18 December 2009
  • Element:Cinful-1
    {{Element ...genome of ''Zea mays'' ([[Literature:66254|San Miguel et al. 1998]]). This element belongs to a lineage of plant LTR retrotransposons (''Tat''), sibling of ot
    1 KB (203 words) - 18:27, 10 November 2009
  • Element:Cyclops-2
    {{Element
    1 KB (198 words) - 16:36, 17 December 2009
  • Element:Dane-1
    {{Element ...omain is detectable at the C-terminal end of the integrase domain of this element. The PBS of fungi and vertebrate chromoviruses, differs significantly from
    2 KB (239 words) - 16:26, 11 November 2009
  • Element:Grande1-4
    {{Element ...ypes, subtype 1-4 is taken as representative. The genome structure of this element is 13.8 Kb in size including LTRs of 0.6 Kb. The internal region displays a
    2 KB (253 words) - 18:28, 10 November 2009
  • Element:HERV-E
    {{Element
    1 KB (174 words) - 08:26, 4 May 2010
  • Element:HERV-K10
    {{Element
    2 KB (305 words) - 15:30, 6 May 2011

Page text matches

  • Element:Yokozuna
    {{Element ...Literature:55859|Ohbayashi ''et al.'' 1998]]). The internal region of this element contains a Primer Binding Site (PBS), a single long Open Reading Frame (ORF
    2 KB (234 words) - 15:48, 13 January 2010
  • Element:Spirobel
    {{Element ...is an acronym derived from "''Trichinella <u>spi</u>ralis <u>Bel</u>/Pao'' element". ''Spirobel'' belongs to the ''Tas'' clade ([[Literature:14755|Copeland ''
    1 KB (163 words) - 17:48, 16 December 2009
  • Element:Cer7
    {{Element ...enorhabditis elegans'' ([[Literature:8238|Bowen and McDonald 1999]]). This element belongs to the ''Tas'' clade ([[Literature:14755|Copeland ''et al.'' 2005]]
    2 KB (242 words) - 17:50, 16 December 2009
  • Element:Copia
    {{Element ...spp'' ([[Literature:59075|Peterson-Burch and Voytas 2002]]). The ''Copia'' element described in ''Drosophila simulans'' ([[Literature85100|Yoshioka ''et al.''
    2 KB (211 words) - 16:01, 13 January 2010
  • Phylogeny:RNaseH Ty3/Gypsy
    rect 361 12 419 28 [[Element:Retrosat-2|Retrosat-2]] rect 361 27 399 43 [[Element:Bagy-1|Bagy-1]]
    5 KB (452 words) - 08:53, 20 August 2010
  • Phylogeny:GAG Ty3/Gypsy
    rect 309 138 344 154 [[Element:Maggy|Maggy]] rect 309 117 350 133 [[Element:Dane-1|Dane-1]]
    5 KB (456 words) - 14:00, 25 November 2009
  • Phylogeny:GAGPOL Ty3/Gypsy
    rect 288 12 336 28 [[Element:Peabody|Peabody]] rect 288 31 307 47 [[Element:Del|Del]]
    5 KB (458 words) - 14:01, 25 November 2009
  • Element:Tdh2
    {{Element ...yomyces hansenii'' ([[Literature:54327|Neuvéglise ''et al.'' 2002]]). This element belongs to ''Ty (Pseudovirus)'' clade one of the three original genera on w
    2 KB (222 words) - 16:39, 27 January 2010
  • Phylogeny:POL Ty3/Gypsy
    rect 345 12 364 28 [[Element:Del|Del]] rect 345 29 393 45 [[Element:Peabody|Peabody]]
    5 KB (462 words) - 14:04, 25 November 2009
  • Element:Blastopia
    {{Element ...'' is 5.4 Kb in size including LTRs of 277 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to tRNA<sup>Pro</sup>, a
    1 KB (164 words) - 17:57, 10 November 2009
  • Phylogeny:RT Ty3/Gypsy
    rect 424 857 483 873 [[Element:Grande1-4|Grande1-4]] rect 424 876 460 892 [[Element:RIRE2|RIRE2]]
    5 KB (463 words) - 14:06, 25 November 2009
  • Element:Tnt-1
    {{Element |description=''Tnt1'' was the first ''Ty1/Copia'' transposable element found in ''Nicotiana tabacum'' ([[Literature:27170|Grandbastien ''et al.''
    1 KB (160 words) - 14:26, 19 January 2010
  • Element:Tas
    {{Element ...in any nematode species and received its name standing for transposon-like element of ''Ascaris'' ([[Literature:100599|Aeby'' et al.'' 1986]]). Two variant fo
    2 KB (276 words) - 14:58, 24 May 2010
  • Element:Cer2
    {{Element ...'' is 9.8 Kb in size including LTRs of 646 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Gly</sup>,
    1 KB (174 words) - 18:08, 10 November 2009
  • Element:CoDi5.5
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-II'' clade ([[Literature:100685|Maumus ''et al.'' 2009]])
    1 KB (177 words) - 16:31, 22 February 2010
  • Element:Cer3
    {{Element ...'' is 8.7 Kb in size including LTRs of 424 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Gly</sup>,
    1 KB (175 words) - 18:09, 10 November 2009
  • Element:Hydra3-1
    {{Element ...dra magnipapillata'' ([[Literature:100596|Llorens ''et al.'' 2009]]). This element belongs to the ''Tas'' clade ([[Literature:14755|Copeland ''et al.'' 2005]]
    1 KB (175 words) - 17:49, 16 December 2009
  • Element:Oryco1-1
    {{Element |description=''Oryco1-1'' (''Oryco'' ''Copia'' element type 1-1) is a ''Ty1/Copia''-like LTR retrotransposon found in the genome o
    1 KB (165 words) - 15:31, 19 January 2010
  • Phylogeny:INT Ty3/Gypsy
    rect 345 463 418 479 [[Element:Grasshopper|Grasshopper]] rect 345 447 386 463 [[Element:MGLR3|MGLR3]]
    5 KB (463 words) - 07:30, 28 April 2010
  • Element:Hydra2-1
    {{Element ...M is 4.8 Kb in size including LTRs of 0.22 kb. The internal region of this element displays a Primer Binding Site (PBS), a single Open Reading Frame (ORF) tha
    1 KB (176 words) - 16:06, 19 January 2010
  • Phylogeny:AP Ty3/Gypsy
    rect 482 396 503 412 [[Element:412|412]] rect 482 415 534 431 [[Element:Blastopia|Blastopia]]
    5 KB (463 words) - 13:57, 25 November 2009
  • Element:CoDi5.6
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-II'' clade ([[Literature:100685|Maumus ''et al.'' 2009]])
    1 KB (173 words) - 16:32, 22 February 2010
  • Element:Amn-ichi
    {{Element ...''Anolis carolinensis'' ([[Literature:95833|Piskurek et al. 2008]]). This element belongs to ''V-clade'' ([[Literature:100596|Llorens et al. 2009]]) the chro
    2 KB (238 words) - 10:02, 2 December 2009
  • Element:Ty1B
    {{Element ...ee of variation ([[Literature:100661|Boeke and Sandmeyer 1991]]). ''Ty1B'' element has been take as reference sequence to our studies. ''Ty1B'' belongs to ''T
    2 KB (308 words) - 16:38, 27 January 2010
  • Element:Fourf
    {{Element ...1996]]; [[Literature:23437|Fu et al. 2002]]). The internal region of this element contains a Primer Binding Site (PBS) complementary to a tRNA<sup>iMet</sup>
    2 KB (223 words) - 10:02, 25 January 2010
  • Element:Amn-ni
    {{Element ...'Danio rerio'' Zebrafish ([[Literature:100596|Llorens et al. 2009]]). This element belongs to V-clade ([[Literature:100596|Llorens et al. 2009]]) the chromovi
    2 KB (242 words) - 12:02, 2 December 2009
  • Element:CoDi5.4
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-II'' clade ([[Literature:100685|Maumus ''et al.'' 2009]])
    1 KB (178 words) - 16:30, 22 February 2010
  • Element:Kobel
    {{Element ...cronym derived from ''Saccoglossus <u>ko</u>walevskii'' <u>''Bel</u>/Pao'' element. ''Kobel'' belongs to the ''Sinbad'' clade ([[Literature:14755|Copeland ''e
    1 KB (183 words) - 14:07, 11 December 2009
  • Element:CoDi5.2
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-II'' clade ([[Literature:100685|Maumus ''et al.'' 2009]])
    1 KB (178 words) - 16:32, 22 February 2010
  • Element:Amn-san
    {{Element ...trotransposon characterized in the ''Xenopus (Silurana) tropicalis''. This element belongs to V-clade ([[Literature:100596|Llorens et al. 2009]]) the chromovi
    2 KB (248 words) - 19:13, 15 June 2020
  • Element:CoDi5.1
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-II'' clade ([[Literature:100685|Maumus ''et al.'' 2009]])
    1 KB (184 words) - 16:32, 22 February 2010
  • Element:Zeco2
    {{Element ...y1/Copia''-like LTR retrotransposon described, together its closer related element ''Zeco1'', in the genome of the zebrafish (''Danio rerio'') ([[Literature:9
    1 KB (194 words) - 09:01, 16 March 2010
  • Element:HMS-Beagle
    {{Element ...le'' is 7 Kb in size including LTRs of 266 nt. The internal region of this element displays a Primer Binding Site for a tRNA<sup>Lys</sup>, two ORFs for ''gag
    1 KB (174 words) - 08:52, 29 April 2010
  • Element:B1147A04.5
    {{Element ...4.5 is 22.2 Kb in size including LTRs of 1 Kb. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Arg</sup>,
    1 KB (187 words) - 18:29, 10 November 2009
  • Element:1731
    {{Element ...''. 2009]]). ''1731'' is 4648 bp in size, including two 336-bp LTRs. This element contains a Primer Binding Site (PBS) for a tRNA<sup>iMet</sup>, two overlap
    1 KB (178 words) - 08:37, 14 January 2010
  • Element:Tse1
    {{Element ...iterature:54327|Neuvéglise ''et al.'' 2002]]). The internal region of this element presents a Primer Binding Site (PBS) and two overlapping Open Reading Frame
    1 KB (191 words) - 16:37, 27 January 2010
  • Element:Gabel
    {{Element ...an acronym derived from “''<u>Ga</u>sterosteus aculeatus <u>Bel</u>/Pao'' element”. ''Gabel'' belongs to the ''Suzu'' clade ([[Literature:14755|Copeland ''
    1 KB (196 words) - 14:06, 11 December 2009
  • Element:Suzu
    {{Element ...al PR and RH motifs have been found in the [[Gabel|''Gabel'']] ''Bel/Pao'' element also belonging to the ''Suzu'' clade ([[Literature:100596|Llorens ''et al.'
    2 KB (241 words) - 14:05, 11 December 2009
  • Element:PyRE1G1
    {{Element ...(except for a single nucleotide) 204-bp LTRs. The internal region of this element contains a single long Open Reading Frame (ORF) upstream and downstream fla
    1 KB (200 words) - 16:22, 22 December 2009
  • Element:Purbel
    {{Element ...ng LTRs of 583 nt (5’LTR) and 687 nt (3’ LTR). The internal region of this element displays a single ORF for ''gag'' and ''pol'' genes. The encoded gag produc
    1 KB (199 words) - 14:04, 11 December 2009
  • Element:XEN1
    {{Element ...([[Literature:35936|Kambol ''et al.'' 2003]]). The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Lys2</sup>
    1 KB (189 words) - 11:43, 7 September 2010
  • Element:Ogre
    {{Element ...e'' is 22.7 Kb in size including LTRs of 5 Kb. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Arg</sup>,
    1 KB (194 words) - 16:38, 17 December 2009
  • Element:CoDi5.3
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-II'' clade ([[Literature:100685|Maumus ''et al.'' 2009]])
    1 KB (190 words) - 16:33, 22 February 2010
  • Element:Sinbad
    {{Element ...' ([[Literature:14754|Copeland ''et al.'' 2006]]). About 50 copies of this element appear to reside in the ''S. mansoni'' genome.
    2 KB (213 words) - 18:05, 5 January 2010
  • Element:Cft-1
    {{Element ...of ''Cladosporium fulvum'' ([[Literature:49102|McHale et al. 1992]]). This element belongs to the ''Chromoviridae'' branch, term suggested ([[Literature:4725
    2 KB (238 words) - 16:28, 11 November 2009
  • Element:CFG1
    {{Element ...7 Kb in size including LTRs of 192 and 189 nt. The internal region of this element displays a Primer Binding Site (PBS), a single Open Reading Frame (ORF) tha
    2 KB (203 words) - 16:11, 19 January 2010
  • Element:CoDi6.6
    {{Element ...n size, including LTRs of 279 nt. The LTRs bounded internal region of this element encodes for two overlapping Open Reading Frames (ORFs). The first ORF conta
    2 KB (205 words) - 18:56, 8 April 2010
  • Element:CoDi6.4
    {{Element ...is 5237 bp in size, including LTRs of 413 nts. The internal region of this element encodes for a single Open Reading Frame (ORF) of 1441 amino acids containin
    2 KB (198 words) - 18:58, 8 April 2010
  • Element:RTvr2
    {{Element ...rature:83886|Xiao ''et al.'' 2007]]).Phylogenetic analyses reveal how this element belongs to ''Tork'' clade within the Branch 2 of ''Ty1/Copia'' family ([[Li
    1 KB (216 words) - 14:37, 19 January 2010
  • Element:pCal
    {{Element ...ndida albicans'' ([[Literature:48474|Matthews ''et al.'' 1997]]). ''pCal'' element belongs to ''Ty (Pseudovirus)'' clade one of the three original genera on w
    2 KB (252 words) - 16:39, 27 January 2010
  • Element:Ty2
    {{Element ...002]]). The central PPT2 has been demonstrated to be not essential for the element transposition ([[Literature:30799|Heyman ''et al.'' 2003]]; [[Literature:23
    2 KB (261 words) - 16:38, 27 January 2010
  • Element:Osser
    {{Element ...in size, including two identical 197-bp LTRs. The internal region of this element presents a Primer Binding Site (PBS) for a tRNA<sup>Met</sup>, two overlapp
    1 KB (197 words) - 15:48, 26 December 2009
  • Element:Sto-4
    {{Element ...998]]). According to ([[Literature:100596|Llorens ''et al''. 2009]]), this element belongs to ''Tork'' clade within Branch 2 of the ''Ty1/Copia'' LTR retrotra
    1 KB (195 words) - 12:27, 19 January 2010
  • Element:Gmr1
    {{Element The internal region of this element displays a Primer Binding Site (PBS)
    2 KB (263 words) - 00:37, 25 December 2009
  • Element:Saci-6
    {{Element ...ng), including LTRs of 78 nt (5´LTR) and 177 nt (3´LTR). It is a truncated element which LTRs flanked a single ORF that encodes for gag and pol polyproteins.
    2 KB (208 words) - 14:08, 11 December 2009
  • Element:Koala
    {{Element [[Category:Element]]
    1 KB (145 words) - 09:22, 13 January 2010
  • Element:Tribel
    {{Element ...is an acronym derived from “''<u>Tri</u>bolium castaneum <u>Bel</u>/Pao'' element”. ''Tribel'' belongs to the ''Bel'' clade ([[Literature:14755|Copeland ''
    2 KB (225 words) - 12:12, 18 December 2009
  • Element:Tft2
    {{Element ...ne is 13.2 Kb in size including LTRs of 0.5Kb. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA <sup>Arg</sup>
    2 KB (226 words) - 18:26, 10 November 2009
  • Phylogeny:GagPol
    rect 340 1033 363 1047 [[Element:VMV|VMV]] rect 340 1042 388 1056 [[Element:SA-OMVV|SA-OMVV]]
    6 KB (569 words) - 08:21, 23 December 2020
  • Element:Tkm1
    {{Element ...ize (5994 bp long), including two 385-bp LTRs. The internal region of this element presents a Primer Binding Site (PBS) complementary to a tRNA<sup>iMet</sup>
    2 KB (228 words) - 16:36, 27 January 2010
  • Element:DrFV-1
    {{Element ...w see [[Literature:49494|Meiering and Linial 2001]]). The presence of this element in ''Danio rerio'' suggests that spumaretroviruses are more widely distribu
    2 KB (288 words) - 08:54, 4 May 2010
  • Element:Hopscotch
    {{Element [[Category:Element]]
    1 KB (157 words) - 09:26, 13 January 2010
  • Element:Humnum
    {{Element [[Category:Element]]
    1 KB (152 words) - 11:09, 23 December 2009
  • Element:CoDi4.5
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-I'' clade, within Branch 1 of the ''Ty1/Copia'' family ([
    2 KB (215 words) - 16:38, 22 February 2010
  • Element:Xanthias
    {{Element [[Category:Element]]
    1 KB (145 words) - 15:51, 13 January 2010
  • Element:Tork4
    {{Element [[Category:Element]]
    1 KB (152 words) - 15:13, 18 January 2010
  • Element:Endovir1-1
    {{Element ...mains that exhibit a 24% amino acid identity to ''SIRE-1'' other sirevirus element ([[Literature:59076|Peterson-Burch ''et al.'' 2000]]). In comparison to oth
    2 KB (288 words) - 15:25, 13 January 2010
  • Element:CsRN1
    {{Element ...LTRs which display an average size of 471 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Trp</sup>,
    1 KB (158 words) - 18:15, 10 November 2009
  • Element:Ulysses
    {{Element ...''Drosophila virilis'' ([[Literature:67015|Scheinker et al. 1990]]). This element belongs to ''Osvaldo'' clade ([[Literature:46552|Malik and Eickbush 1999]])
    1 KB (142 words) - 18:17, 10 November 2009
  • Element:pCretro3
    {{Element [[Category:Element]]
    1 KB (157 words) - 11:19, 21 April 2010
  • Element:CoDi2.4
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-I'' clade ([[Literature:100685|Maumus ''et al.'' 2009]]),
    2 KB (227 words) - 16:44, 22 February 2010
  • Element:pCretro6
    {{Element [[Category:Element]]
    1 KB (162 words) - 11:44, 21 April 2010
  • Element:CoDi3.1
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-I'' clade ([[Literature:100685|Maumus ''et al.'' 2009]]),
    2 KB (230 words) - 16:39, 22 February 2010
  • Element:Cubel
    {{Element ...acronym derived from “''<u>Cu</u>lex quinquefasciatus'' ''<u>Bel</u>/Pao'' element”. ''Cubel'' belongs to the ''Pao'' clade ([[Literature:14755|Copeland ''e
    1 KB (163 words) - 14:11, 11 December 2009
  • Element:MuERV-L
    {{Element ...[[Literature:5609|Benit ''et al.'' 1997]]; [[Literature:5608|1999]]). This element belongs to the group of ERV-L elements, and its genomic structure is 6.5 Kb
    1 KB (138 words) - 08:48, 4 May 2010
  • Element:Hydra1-2
    {{Element [[Category:Element]]
    1 KB (176 words) - 14:42, 14 January 2010
  • Element:Tricopia
    {{Element [[Category:Element]]
    1 KB (157 words) - 09:22, 14 January 2010
  • Element:CoDi4.3
    {{Element ...umus ''et al.'' 2009]]; [[Literature:86909|Bowler ''et al.'' 2008]]). This element belongs to ''CoDi-I'' clade ([[Literature:100685|Maumus ''et al.'' 2009]])
    2 KB (237 words) - 16:43, 22 February 2010
  • Element:Moose
    {{Element [[Category:Element]]
    1 KB (171 words) - 17:41, 16 December 2009
  • Element:Hydra1-1
    {{Element [[Category:Element]]
    1 KB (173 words) - 14:53, 14 January 2010
  • Element:Gloin
    {{Element ...cute;LTR ([[Literature:47259|Mar&iacute;n and Llor&eacute;ns 2000]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (230 words) - 16:47, 11 November 2009
  • Element:412
    {{Element ...12 is 6.9 Kb in size including LTRs of 310 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA <sup>Lys</sup>
    2 KB (245 words) - 18:07, 10 November 2009
  • Element:Woot
    {{Element ...ot'' is 12.2 Kb size including LTRs of 3.6 Kb. The internal region of this element displays a Primer Binding Site (PBS) for a tRNA<sup>His</sup>, three Open R
    1 KB (164 words) - 18:18, 10 November 2009
  • Element:ZFERV-2
    {{Element ...us retrovirus'' from clone DKEY-26I24 (ZFERV-2) is counterpart of the ZERV element originally isolated from Zebrafish (''Danio rerio'') species ([[Literature:
    2 KB (246 words) - 08:07, 4 May 2010
  • Element:Peabody
    {{Element ...djacent to the 3&acute;LTR ([[Literature:85496|Volman et al. 1998]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (233 words) - 16:38, 17 December 2009
  • Element:Opie-2
    {{Element ...pol'' domains typical of ''Ty1/Copia'' elements are well preserved in this element. Similarly to other ''Sire'' elements, ''Opie-2'' contains a putative ''env
    2 KB (329 words) - 15:26, 13 January 2010
  • Element:PyERV
    {{Element ...([[Literature:32642|Huder ''et al.'' 2002]]). The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Trp</sup>,
    2 KB (245 words) - 07:57, 3 May 2010
  • Element:Grande1-4
    {{Element ...ypes, subtype 1-4 is taken as representative. The genome structure of this element is 13.8 Kb in size including LTRs of 0.6 Kb. The internal region displays a
    2 KB (253 words) - 18:28, 10 November 2009
  • Element:Dane-1
    {{Element ...omain is detectable at the C-terminal end of the integrase domain of this element. The PBS of fungi and vertebrate chromoviruses, differs significantly from
    2 KB (239 words) - 16:26, 11 November 2009
  • Element:Mag
    {{Element ...ag'' is 4.6Kb in size including LTRs of 77 nt. The internal region of this element displays a Primer Binding Site (PBS) complementary to a tRNA<sup>Ser</sup>,
    1 KB (173 words) - 16:08, 19 January 2010
  • Element:Micropia
    {{Element ...ning et al. 1983]]; [[Literature:32787|Huijser et al. 1988]]). Later, this element was also described in ''Drosophila melanogaster'' as a LTR retrotransposon
    2 KB (254 words) - 17:56, 10 November 2009
  • Element:Mdg3
    {{Element ...nd 293 nt (depending on the ''mdg3'' variant). The internal region of this element displays a Primer Binding Site (PBS), a single Open Reading Frame (ORF) tha
    1 KB (171 words) - 17:56, 10 November 2009
  • Element:Monkey
    {{Element ...multiples stop codon ([[Literature:3730|Balint-kurti et al. 2000]]). This element presents a detectable chromodomain at the C-terminal end of the integrase d
    2 KB (260 words) - 23:27, 13 March 2010
  • Element:RCHO-K1
    {{Element ...recognizes a target G-repeat sequence belonging to the short interspersed element family of retroposons. This retrovirus has been detected in CHO-K1 cells an
    1 KB (165 words) - 08:42, 4 May 2010
  • Element:Real
    {{Element ...the 3&acute;LTR ([[Literature:36073|Kaneko, Tanaka and Tsuge 2000]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (244 words) - 16:36, 11 November 2009
  • Element:Pyggy
    {{Element ...acent to the 3' LTR ([[Literature:85489|Konstantinova et al. 2002]]). This element presents a detectable chromodomain at the C-terminal end of the integrase d
    2 KB (263 words) - 12:19, 29 January 2010
  • Element:Galadriel
    {{Element .... 1999]]; [[Literature:47259|Mar&iacute;n and Llor&eacute;ns 2000]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (236 words) - 16:42, 11 November 2009
  • Element:MGLR3
    {{Element ...t (PPT) adjacent to the 3&acute;LTR ([[Literature:36122|Kang 2001]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (242 words) - 16:33, 11 November 2009
  • Element:Skipper
    {{Element ...adjacent to the 3&acute;LTR ([[Literature:42928|Leng et al. 1998]]). This element presents a detectable chromodomain at the C-terminal end of its integrase.
    2 KB (245 words) - 16:16, 11 November 2009
  • Element:Retrosat-2
    {{Element ...adjacent to the 3&acute;LTR ([[Literature:85490|Llaca et al 1998]]). This element presents a detectable chromodomain at the C-terminal end of the integrase
    2 KB (245 words) - 16:50, 11 November 2009

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Welcome to the Gypsy Database (GyDB) an open editable database about the evolutionary relationship of viruses, mobile genetic elements (MGEs) and the genomic repeats where we invite all authors to contribute with their knowledge to improve and expand the topics.
Cite this project:

Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J. Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., LaTorre, A., Moya, A. (2011) The Gypsy Database (GyDB) of Mobile Genetic Elements: Release 2.0 Nucleic Acids Research (NARESE) 39 (suppl 1): D70-D74 doi: 10.1093/nar/gkq1061

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