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  • Phylogeny:Rt Caulimovirus
    #REDIRECT [[Phylogeny:RT Caulimovirus]]
    39 bytes (4 words) - 14:10, 16 November 2009
  • Phylogeny:AP Bel Pao
    #REDIRECT [[Phylogeny:AP BelPao]]
    33 bytes (4 words) - 12:05, 17 November 2009
  • Phylogeny:GAGPOL Bel Pao
    #REDIRECT [[Phylogeny:GAGPOL BelPao]]
    37 bytes (4 words) - 12:07, 17 November 2009
  • Phylogeny:Gag Bel Pao
    #REDIRECT [[Phylogeny:Gag BelPao]]
    34 bytes (4 words) - 12:09, 17 November 2009
  • Phylogeny:INT Bel Pao
    #REDIRECT [[Phylogeny:INT BelPao]]
    34 bytes (4 words) - 12:10, 17 November 2009
  • Phylogeny:NEF
    #REDIRECT [[Phylogeny:NEF Lentiviridae]]
    40 bytes (4 words) - 12:11, 17 November 2009
  • Phylogeny:Gag BelPao
    #REDIRECT [[Phylogeny:GAG BelPao]]
    34 bytes (4 words) - 12:13, 17 November 2009
  • Phylogeny:Pol Caulimovirus
    #REDIRECT [[Phylogeny:POL Caulimovirus]]
    40 bytes (4 words) - 12:13, 17 November 2009
  • Phylogeny:REV
    #REDIRECT [[Phylogeny:REV Lentiviridae]]
    40 bytes (4 words) - 12:22, 17 November 2009
  • Phylogeny:REX
    #REDIRECT [[Phylogeny:REX Lentiviridae]]
    40 bytes (4 words) - 12:22, 17 November 2009
  • Phylogeny:RNase Bel Pao
    #REDIRECT [[Phylogeny:RNase BelPao]]
    36 bytes (4 words) - 12:24, 17 November 2009
  • Phylogeny:RT Bel Pao
    #REDIRECT [[Phylogeny:RT BelPao]]
    33 bytes (4 words) - 12:24, 17 November 2009
  • Phylogeny:SORF
    #REDIRECT [[Phylogeny:SORF Betaretroviridae]]
    45 bytes (4 words) - 12:26, 17 November 2009
  • Phylogeny:TAT
    #REDIRECT [[Phylogeny:TAT Lentiviridae]]
    40 bytes (4 words) - 12:26, 17 November 2009
  • Phylogeny:TAX
    #REDIRECT [[Phylogeny:TAX Deltaretroviridae]]
    45 bytes (4 words) - 12:26, 17 November 2009
  • Phylogeny:dUTPase
    #REDIRECT [[Phylogeny:dUTPase Retroviridae]]
    44 bytes (4 words) - 12:27, 17 November 2009
  • Phylogeny:ATF caulimovirus
    #REDIRECT [[Phylogeny:ATF Caulimovirus]]
    40 bytes (4 words) - 09:45, 22 April 2010
  • Phylogeny:Bel1 spumaretrovirus
    #REDIRECT [[Phylogeny:Bel1 Spumaretrovirus]]
    44 bytes (4 words) - 09:46, 22 April 2010
  • Phylogeny:Bel2 spumaretrovirus
    #REDIRECT [[Phylogeny:Bel2 Spumaretrovirus]]
    44 bytes (4 words) - 09:46, 22 April 2010
  • Phylogeny:ORF-X Betaretroviridae
    #REDIRECT [[Phylogeny:ORFX Betaretrovirus]]
    43 bytes (4 words) - 09:49, 22 April 2010
  • Phylogeny:AP Caulimovirus
    #REDIRECT [[Phylogeny:AP Caulimoviridae]]
    41 bytes (4 words) - 09:51, 22 April 2010
  • Phylogeny:COAT Caulimovirus
    #REDIRECT [[Phylogeny:COAT Caulimoviridae]]
    43 bytes (4 words) - 09:52, 22 April 2010
  • Phylogeny:COATPOL Caulimovirus
    #REDIRECT [[Phylogeny:COATPOL Caulimoviridae]]
    46 bytes (4 words) - 09:52, 22 April 2010
  • Phylogeny:MOV Caulimovirus
    #REDIRECT [[Phylogeny:MOV Caulimoviridae]]
    42 bytes (4 words) - 09:53, 22 April 2010
  • Phylogeny:POL Caulimovirus
    #REDIRECT [[Phylogeny:POL Caulimoviridae]]
    42 bytes (4 words) - 09:53, 22 April 2010
  • Phylogeny:RNase Caulimovirus
    #REDIRECT [[Phylogeny:RNase Caulimoviridae]]
    44 bytes (4 words) - 09:54, 22 April 2010
  • Phylogeny:RT Caulimovirus
    #REDIRECT [[Phylogeny:RT Caulimoviridae]]
    41 bytes (4 words) - 09:54, 22 April 2010
  • Phylogeny:TAX Deltaretroviridae
    #REDIRECT [[Phylogeny:TAX Deltaretrovirus]]
    43 bytes (4 words) - 09:54, 28 April 2010
  • Phylogeny:TAT Lentiviridae
    #REDIRECT [[Phylogeny:TAT Lentivirus]]
    38 bytes (4 words) - 10:35, 28 April 2010
  • Phylogeny:REX Lentiviridae
    #REDIRECT [[Phylogeny:REX Lentivirus]]
    38 bytes (4 words) - 10:37, 28 April 2010
  • Phylogeny:REV Lentiviridae
    #REDIRECT [[Phylogeny:REV Lentivirus]]
    38 bytes (4 words) - 10:42, 28 April 2010
  • Phylogeny:SORF Betaretroviridae
    #REDIRECT [[Phylogeny:SORF Betaretrovirus]]
    43 bytes (4 words) - 10:58, 28 April 2010
  • Phylogeny:RNase Caulimoviridae
    #REDIRECT [[Phylogeny:RNaseH Caulimoviridae]]
    45 bytes (4 words) - 08:45, 20 August 2010
  • Phylogeny:RNase Retroviridae
    #REDIRECT [[Phylogeny:RNaseH Retroviridae]]
    43 bytes (4 words) - 08:46, 20 August 2010
  • Phylogeny:Rt Bel Pao
    #REDIRECT [[Phylogeny:RT Bel Pao]]
    34 bytes (5 words) - 14:09, 16 November 2009
  • Phylogeny:Gag
    #REDIRECT [[Phylogeny:Gag Ty3Gypsy-Retroviridae]]
    49 bytes (5 words) - 12:08, 17 November 2009
  • Phylogeny:Integrase
    #REDIRECT [[Phylogeny:Integrase Ty3Gypsy-Retroviridae]]
    55 bytes (5 words) - 12:11, 17 November 2009
  • Phylogeny:ORF-X
    #REDIRECT [[Phylogeny:ORF-X Betaretroviridae]]
    46 bytes (4 words) - 12:12, 17 November 2009
  • Phylogeny:Pol Bel Pao
    #REDIRECT [[Phylogeny:POL Bel Pao]]
    35 bytes (5 words) - 12:13, 17 November 2009
  • Phylogeny:Pol LTR Retroelements
    #REDIRECT [[Phylogeny:POL LTR Retroelements]]
    45 bytes (5 words) - 12:14, 17 November 2009
  • Phylogeny:POL LTR Retroelements
    #REDIRECT [[Phylogeny:POL LTR retroelements]]
    45 bytes (5 words) - 12:14, 17 November 2009
  • Phylogeny:Protease
    #REDIRECT [[Phylogeny:Protease LTR retroelements]]
    50 bytes (5 words) - 12:22, 17 November 2009
  • Phylogeny:RT LTR Retroelements
    #REDIRECT [[Phylogeny:RT LTR retroelements]]
    44 bytes (5 words) - 12:25, 17 November 2009
  • Phylogeny:VIF Q
    #REDIRECT [[Phylogeny:VIF-Q Lentiviridae]]
    42 bytes (4 words) - 12:27, 17 November 2009
  • Phylogeny:VPR VPX
    #REDIRECT [[Phylogeny:VPR-VPX Lentiviridae]]
    44 bytes (4 words) - 12:27, 17 November 2009
  • Phylogeny:ENV Errantiviridae
    #REDIRECT [[Phylogeny:ENV Errantivirus (Ty3Gypsy)]]
    51 bytes (6 words) - 11:41, 24 November 2009
  • Phylogeny:ENV Ty1Copia
    #REDIRECT [[Phylogeny:ENV Sire (Ty1Copia)]]
    43 bytes (6 words) - 11:41, 24 November 2009
  • Phylogeny:ENV athila
    #REDIRECT [[Phylogeny:ENV Athila (Ty3Gypsy)]]
    45 bytes (6 words) - 11:42, 24 November 2009
  • Phylogeny:Gin-1
    #REDIRECT [[Phylogeny:GIN-1 Integrases]]
    40 bytes (4 words) - 09:44, 25 November 2009
  • Phylogeny:GIN-1 Integrases
    #REDIRECT [[Phylogeny:INT GIN-1]]
    33 bytes (4 words) - 09:45, 25 November 2009
  • Phylogeny:AP BelPao
    #REDIRECT [[Phylogeny:AP Bel/Pao]]
    34 bytes (5 words) - 13:56, 25 November 2009
  • Phylogeny:AP Ty1Copia
    #REDIRECT [[Phylogeny:AP Ty1/Copia]]
    36 bytes (5 words) - 13:57, 25 November 2009
  • Phylogeny:AP Ty3Gypsy
    #REDIRECT [[Phylogeny:AP Ty3/Gypsy]]
    36 bytes (5 words) - 13:57, 25 November 2009
  • Phylogeny:CHR Ty1Copia
    #REDIRECT [[Phylogeny:CHR Ty1/Copia]]
    37 bytes (5 words) - 13:57, 25 November 2009
  • Phylogeny:GAG BelPao
    #REDIRECT [[Phylogeny:GAG Bel/Pao]]
    35 bytes (5 words) - 13:59, 25 November 2009
  • Phylogeny:GAG Ty1Copia
    #REDIRECT [[Phylogeny:GAG Ty1/Copia]]
    37 bytes (5 words) - 13:59, 25 November 2009
  • Phylogeny:GAG Ty3Gypsy
    #REDIRECT [[Phylogeny:GAG Ty3/Gypsy]]
    37 bytes (5 words) - 14:00, 25 November 2009
  • Phylogeny:GAGPOL BelPao
    #REDIRECT [[Phylogeny:GAGPOL Bel/Pao]]
    38 bytes (5 words) - 14:00, 25 November 2009
  • Phylogeny:GAGPOL Ty1Copia
    #REDIRECT [[Phylogeny:GAGPOL Ty1/Copia]]
    40 bytes (5 words) - 14:00, 25 November 2009
  • Phylogeny:GAGPOL Ty3Gypsy
    #REDIRECT [[Phylogeny:GAGPOL Ty3/Gypsy]]
    40 bytes (5 words) - 14:01, 25 November 2009
  • Phylogeny:INT BelPao
    #REDIRECT [[Phylogeny:INT Bel/Pao]]
    35 bytes (5 words) - 14:02, 25 November 2009
  • Phylogeny:INT Ty1Copia
    #REDIRECT [[Phylogeny:INT Ty1/Copia]]
    37 bytes (5 words) - 14:02, 25 November 2009
  • Phylogeny:INT Ty3Gypsy
    #REDIRECT [[Phylogeny:INT Ty3/Gypsy]]
    37 bytes (5 words) - 14:02, 25 November 2009
  • Phylogeny:POL Bel Pao
    #REDIRECT [[Phylogeny:POL Bel/Pao]]
    35 bytes (5 words) - 14:03, 25 November 2009
  • Phylogeny:POL Ty1Copia
    #REDIRECT [[Phylogeny:POL Ty1/Copia]]
    37 bytes (5 words) - 14:03, 25 November 2009
  • Phylogeny:POL Ty3Gypsy
    #REDIRECT [[Phylogeny:POL Ty3/Gypsy]]
    37 bytes (5 words) - 14:04, 25 November 2009
  • Phylogeny:RNase BelPao
    #REDIRECT [[Phylogeny:RNase Bel/Pao]]
    37 bytes (5 words) - 14:04, 25 November 2009
  • Phylogeny:RNase Ty1Copia
    #REDIRECT [[Phylogeny:RNase Ty1/Copia]]
    39 bytes (5 words) - 14:04, 25 November 2009
  • Phylogeny:RNase Ty3Gypsy
    #REDIRECT [[Phylogeny:RNase Ty3/Gypsy]]
    39 bytes (5 words) - 14:05, 25 November 2009
  • Phylogeny:RT BelPao
    #REDIRECT [[Phylogeny:RT Bel/Pao]]
    34 bytes (5 words) - 14:05, 25 November 2009
  • Phylogeny:RT Ty1Copia
    #REDIRECT [[Phylogeny:RT Ty1/Copia]]
    36 bytes (5 words) - 14:05, 25 November 2009
  • Phylogeny:RT Ty3Gypsy
    #REDIRECT [[Phylogeny:RT Ty3/Gypsy]]
    36 bytes (5 words) - 14:06, 25 November 2009
  • Phylogeny:VPR-VPX Lentiviridae
    #REDIRECT [[Phylogeny:VPR-VPX Lentivirus]]
    42 bytes (4 words) - 10:04, 28 April 2010
  • Phylogeny:VIF-Q Lentiviridae
    #REDIRECT [[Phylogeny:VIF-Q Lentivirus]]
    40 bytes (4 words) - 10:29, 28 April 2010
  • Phylogeny:RNase Bel/Pao
    #REDIRECT [[Phylogeny:RNaseH Bel/Pao]]
    38 bytes (5 words) - 08:44, 20 August 2010
  • Phylogeny:RNase LTR retroelements
    #REDIRECT [[Phylogeny:RNaseH LTR retroelements]]
    48 bytes (5 words) - 08:45, 20 August 2010
  • Phylogeny:RNase Ty3/Gypsy
    #REDIRECT [[Phylogeny:RNaseH Ty3/Gypsy]]
    40 bytes (5 words) - 08:46, 20 August 2010
  • Phylogeny:RNase Ty1/Copia
    #REDIRECT [[Phylogeny:RNaseH Ty1/Copia]]
    40 bytes (5 words) - 08:46, 20 August 2010
  • Phylogeny:GIN GINGER
    #REDIRECT [[Phylogeny:INT GIN/GINGER]]
    38 bytes (5 words) - 08:44, 9 November 2011
  • Phylogeny:Ribonuclease H
    #REDIRECT [[Phylogeny:Ribonuclease H Ty3Gypsy-Retroviridae]]
    60 bytes (6 words) - 12:25, 17 November 2009
  • Phylogeny:Chromodomains
    #REDIRECT [[Phylogeny:CHR Ty3/Gypsy chromoviruses]]
    51 bytes (6 words) - 16:34, 19 November 2009
  • Phylogeny:Eukaryotic Chromodomains
    #REDIRECT [[Phylogeny:CHR eukaryote protein domains]]
    53 bytes (6 words) - 16:36, 19 November 2009
  • Phylogeny:Clan AA
    #REDIRECT [[Phylogeny:Clan AA aspartic peptidases]]
    51 bytes (6 words) - 16:37, 19 November 2009
  • Phylogeny:ENV Athila (Ty3Gypsy)
    #REDIRECT [[Phylogeny:ENV Athila (Ty3/Gypsy)]]
    46 bytes (6 words) - 13:58, 25 November 2009
  • Phylogeny:ENV Errantivirus (Ty3Gypsy)
    #REDIRECT [[Phylogeny:ENV Errantivirus (Ty3/Gypsy)]]
    52 bytes (6 words) - 13:58, 25 November 2009
  • Phylogeny:ENV Sire (Ty1Copia)
    #REDIRECT [[Phylogeny:ENV Sire (Ty1/Copia)]]
    44 bytes (6 words) - 13:59, 25 November 2009
  • Phylogeny:Gag Ty3Gypsy-Retroviridae
    #REDIRECT [[Phylogeny:Gag Ty3/Gypsy-Retroviridae]]
    50 bytes (5 words) - 14:01, 25 November 2009
  • Phylogeny:ENV Errantivirus (Ty3/Gypsy)
    #REDIRECT [[Phylogeny:ENV Errantiviridae (Ty3/Gypsy)]]
    54 bytes (6 words) - 09:52, 28 April 2010
  • Phylogeny:Clan AA aspartic peptidases
    #REDIRECT [[Phylogeny: AP clan AA aspartic peptidases]]
    55 bytes (7 words) - 16:38, 19 November 2009
  • Phylogeny:CAARD
    #REDIRECT [[Phylogeny:AP CAARD (clan AA Reference DB)]]
    55 bytes (8 words) - 16:39, 19 November 2009
  • Phylogeny:ORFB Soymovirus
    [[Category:Phylogeny]] {{Phylogeny
    703 bytes (80 words) - 09:10, 22 April 2010
  • Phylogeny:ENV Sire (Ty1/Copia)
    [[Category:Phylogeny]] {{Phylogeny
    704 bytes (85 words) - 13:59, 25 November 2009
  • Phylogeny:Bel1 Spumaretrovirus
    [[Category:Phylogeny]] {{Phylogeny
    767 bytes (89 words) - 13:16, 26 April 2010
  • Phylogeny:Bel2 Spumaretrovirus
    [[Category:Phylogeny]] {{Phylogeny
    766 bytes (89 words) - 13:16, 26 April 2010
  • Phylogeny:AP Caulimoviridae dom2
    [[Category:Phylogeny]] {{Phylogeny
    776 bytes (95 words) - 15:24, 17 June 2010
  • Phylogeny:ORFC Soymovirus
    [[Category:Phylogeny]] {{Phylogeny
    848 bytes (102 words) - 09:30, 22 April 2010
  • Phylogeny:ATF Caulimovirus
    [[Category:Phylogeny]] {{Phylogeny
    893 bytes (102 words) - 09:45, 22 April 2010
  • Phylogeny:CHR Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    938 bytes (106 words) - 10:09, 11 May 2010
  • Phylogeny:ORFX Betaretrovirus
    [[Category:Phylogeny]] {{Phylogeny
    889 bytes (93 words) - 09:49, 22 April 2010
  • Phylogeny:ORF2 Badnavirus
    [[Category:Phylogeny]] {{Phylogeny
    1 KB (120 words) - 09:10, 22 April 2010
  • Phylogeny:TAV Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    1 KB (120 words) - 09:39, 22 April 2010
  • Sidebars:Retroelements
    ** Phylogeny:POL_LTR_retroelements|Phylogenetic trees ** Phylogeny:CAARD|Clan AA Ref. DB
    1 KB (155 words) - 09:53, 7 November 2011
  • EditorsGuide
    Phylogenies are managed by the [[Template:Phylogeny|Phylogeny]] template. <nowiki>{{Phylogeny
    5 KB (816 words) - 14:37, 9 June 2009
  • Phylogeny:AP CAARD (clan AA Reference DB)
    {{Phylogeny ...ences belonging to different clan AA families (to visualize a conventional phylogeny inferred based on these sequences, click here). The set of tools is stored
    2 KB (313 words) - 16:39, 19 November 2009
  • Phylogeny:VAP Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    1 KB (150 words) - 09:42, 22 April 2010
  • Phylogeny:dUTPase retroelements
    [[Category:Phylogeny]] {{Phylogeny
    1 KB (145 words) - 09:00, 22 April 2010
  • Phylogeny:INT Bel/Pao
    [[Category:Phylogeny]] {{Phylogeny
    1 KB (162 words) - 14:02, 25 November 2009
  • Phylogeny:GAGPOL Bel/Pao
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (163 words) - 14:00, 25 November 2009
  • Phylogeny:POL Bel/Pao
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (166 words) - 14:03, 25 November 2009
  • Phylogeny:GAG Bel/Pao
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (166 words) - 13:59, 25 November 2009
  • Phylogeny:RNaseH Bel/Pao
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (167 words) - 08:49, 20 August 2010
  • Phylogeny:AP Bel/Pao
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (167 words) - 13:56, 25 November 2009
  • Phylogeny:RT Bel/Pao
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (168 words) - 14:05, 25 November 2009
  • Phylogeny:MOV Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (185 words) - 09:53, 22 April 2010
  • Phylogeny:POL Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (186 words) - 09:53, 22 April 2010
  • Phylogeny:COAT Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (186 words) - 09:52, 22 April 2010
  • Phylogeny:RT Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (188 words) - 09:54, 22 April 2010
  • Phylogeny:RNaseH Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (188 words) - 08:50, 20 August 2010
  • Phylogeny:COATPOL Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (189 words) - 08:25, 28 April 2010
  • Phylogeny:ENV Athila (Ty3/Gypsy)
    {{Phylogeny
    720 bytes (85 words) - 13:58, 25 November 2009
  • Phylogeny:TAX Deltaretrovirus
    {{Phylogeny
    810 bytes (93 words) - 10:48, 28 April 2010
  • Phylogeny:REX Lentivirus
    {{Phylogeny
    804 bytes (92 words) - 10:52, 28 April 2010
  • Phylogeny:NEF Lentiviridae
    {{Phylogeny
    795 bytes (90 words) - 12:11, 17 November 2009
  • Phylogeny:SORF Betaretrovirus
    {{Phylogeny
    845 bytes (95 words) - 11:00, 28 April 2010
  • Phylogeny:AP Caulimoviridae
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (238 words) - 15:22, 17 June 2010
  • Phylogeny:CHR retroelement
    [[Category:Phylogeny]] {{Phylogeny
    2 KB (232 words) - 10:10, 11 May 2010
  • Phylogeny:VPR-VPX Lentivirus
    {{Phylogeny
    937 bytes (104 words) - 10:51, 28 April 2010
  • Phylogeny:ENV Errantiviridae (Ty3/Gypsy)
    {{Phylogeny
    1 KB (115 words) - 11:02, 28 April 2010
  • Phylogeny:TAT Lentivirus
    {{Phylogeny
    1 KB (115 words) - 10:51, 28 April 2010
  • Phylogeny:VIF-Q Lentivirus
    {{Phylogeny
    1 KB (115 words) - 10:50, 28 April 2010
  • Phylogeny:ENV Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (253 words) - 14:15, 17 May 2010
  • Phylogeny:REV Lentivirus
    {{Phylogeny
    1 KB (119 words) - 10:52, 28 April 2010
  • Element:Cer10-1
    ...s suggests that Cer10 might constitute an own clade within the ''Bel/Pao'' phylogeny. The genome of ''Cer10-1'' is 8 Kb in size (8097 bp in lenght), the interna
    1 KB (201 words) - 17:46, 16 December 2009
  • Phylogeny:AP Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (269 words) - 14:00, 27 April 2010
  • Phylogeny:POL Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (268 words) - 08:38, 18 November 2009
  • Phylogeny:GAGPOL Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (264 words) - 08:41, 18 November 2009
  • Phylogeny:RT Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (270 words) - 08:35, 18 November 2009
  • Phylogeny:INT Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (268 words) - 08:40, 18 November 2009
  • Phylogeny:RNaseH Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (269 words) - 08:51, 20 August 2010
  • Phylogeny:GAG Retroviridae
    [[Category:Phylogeny]] {{Phylogeny
    3 KB (267 words) - 08:43, 18 November 2009
  • Element:Cer1
    ...suggest that ''Cer1'' might be a distantly related of ''Cer2-3'' clade ([[Phylogeny:GagPol|see gag-pro-pol tree in section "phylogenies"]]). The genomic struc
    1 KB (216 words) - 18:08, 10 November 2009
  • Phylogeny:GAG Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    4 KB (358 words) - 09:09, 27 April 2010
  • Phylogeny:RNaseH Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    4 KB (354 words) - 08:52, 20 August 2010
  • Phylogeny:INT Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    4 KB (365 words) - 09:06, 27 April 2010
  • Phylogeny:AP Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    4 KB (366 words) - 10:06, 26 April 2010
  • Phylogeny:RT Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    4 KB (366 words) - 09:04, 27 April 2010
  • Phylogeny:GAGPOL Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    4 KB (360 words) - 09:08, 27 April 2010
  • Phylogeny:POL Ty1/Copia
    [[Category:Phylogeny]] {{Phylogeny
    4 KB (364 words) - 09:05, 27 April 2010
  • Element:Cigr-1
    ...a distant ''Mag'' recombinant or a sibling lineage of ''Mag'' clade ([[Phylogeny:GagPol|see gag-pro-pol tree in section "phylogenies"]]). The genomic struc
    2 KB (274 words) - 12:23, 18 December 2009
  • Element:HERV-K10
    ...100589|Fauquet ''et al''. 2005]]) or that they share a common ancestor ([[Phylogeny:ENV_Retroviridae|see env tree in section "phylogenies"]]).
    2 KB (305 words) - 15:30, 6 May 2011
  • Element:SERV
    ...:100589|Fauquet ''et al''. 2005]]) or that they share a common ancestor ([[Phylogeny:ENV_Retroviridae|see env tree in section &quot;phylogenies&quot;]]).
    2 KB (325 words) - 15:14, 3 May 2010
  • Element:SMRV-H
    ...:100589|Fauquet ''et al''. 2005]]) or that they share a common ancestor ([[Phylogeny:ENV_Retroviridae|see env tree in section &quot;phylogenies&quot;]]).
    2 KB (320 words) - 15:17, 3 May 2010
  • Element:SRV-1
    ...:100589|Fauquet ''et al''. 2005]]) or that they share a common ancestor ([[Phylogeny:ENV_Retroviridae|see env tree in section &quot;phylogenies&quot;]]).
    2 KB (332 words) - 15:16, 3 May 2010
  • GINGER1
    ...its ''Ty3/Gypsy'' retrotransposable carrier (for more details see the DDE phylogeny). Based on INT-like structural potential similarities, the INT coded by ''G
    3 KB (357 words) - 12:04, 4 November 2011
  • Element:MPMV
    ...:100589|Fauquet ''et al''. 2005]]) or that they share a common ancestor ([[Phylogeny:ENV_Retroviridae|see env tree in section &quot;phylogenies&quot;]]).
    3 KB (338 words) - 15:16, 3 May 2010
  • Phylogeny:RNaseH Ty3/Gypsy
    [[Category:Phylogeny]] {{Phylogeny
    5 KB (452 words) - 08:53, 20 August 2010
  • Clan AA
    ...an in progress database created to investigate the major consensus and the phylogeny of clan AA to typify the different protein families by sequence logos and H
    6 KB (870 words) - 07:48, 4 May 2010
  • Phylogeny:GAG Ty3/Gypsy
    [[Category:Phylogeny]] {{Phylogeny
    5 KB (456 words) - 14:00, 25 November 2009
  • Phylogeny:GAGPOL Ty3/Gypsy
    [[Category:Phylogeny]] {{Phylogeny
    5 KB (458 words) - 14:01, 25 November 2009
  • Element:JSRV
    ...100589|Fauquet ''et al''. 2005]]) or that they share a common ancestor ([[Phylogeny:ENV_Retroviridae|see env tree in section &quot;phylogenies&quot;]]).
    3 KB (352 words) - 15:18, 3 May 2010
  • Phylogeny:POL Ty3/Gypsy
    [[Category:Phylogeny]] {{Phylogeny
    5 KB (462 words) - 14:04, 25 November 2009
  • Phylogeny:RT Ty3/Gypsy
    [[Category:Phylogeny]] {{Phylogeny
    5 KB (463 words) - 14:06, 25 November 2009
  • Bel/Pao
    ...enetic results reported by both [[Phylogeny:GAGPOL_Bel/Pao|gag-pol]] and [[Phylogeny:POL_Bel/Pao|pol]] ''Bel/Pao'' inferred trees</center>
    7 KB (985 words) - 07:24, 25 May 2010
  • Phylogeny:INT Ty3/Gypsy
    [[Category:Phylogeny]] {{Phylogeny
    5 KB (463 words) - 07:30, 28 April 2010
  • Phylogeny:AP Ty3/Gypsy
    [[Category:Phylogeny]] {{Phylogeny
    5 KB (463 words) - 13:57, 25 November 2009
  • Phylogeny:CHR eukaryote protein domains
    [[Category:Phylogeny]] {{Phylogeny
    11 KB (1,436 words) - 10:41, 11 May 2010
  • Retroviridae
    ...]]), which has unclear classification but that the common LTR retroelement phylogeny places within Class 1 (see, [[Literature:100596|Llorens ''et al''. 2009]]). ...c results reported by both [[Phylogeny:GAGPOL_Retroviridae|gag-pol]] and [[Phylogeny:POL_Retroviridae|pol]] ''Retroviridae'' inferred trees</center>
    13 KB (1,793 words) - 14:36, 29 April 2010
  • PhylogenyTrees
    ...p of enzymes we have reconstructed by maximum likelihood clicking [[ href="phylogeny.php?tree=caard|here ]]. </p> </div> ...conventional phylogeny inferred based on these sequences, click [[ href="phylogeny.php?tree=clanaa|here]]). The set of tools is stored by family datasheets in
    17 KB (2,344 words) - 15:24, 26 January 2009
  • Element:MMTV
    ...100589|Fauquet ''et al''. 2005]]) or that they share a common ancestor ([[Phylogeny:ENV_Retroviridae|see env tree in section &quot;phylogenies&quot;]]).
    3 KB (399 words) - 15:19, 3 May 2010
  • Flowchart
    ...milies. The alignment was refined using a [[Phylogeny:Clan_AA|conventional phylogeny]] as guide tree. While performing this alignment, we identified 6 amino aci
    10 KB (1,555 words) - 07:03, 23 December 2020
  • Ty1/Copia
    ...ording to ([[Literature:100596|Llorens ''et al'' 2009]]), an update of the phylogeny of ''Ty1/Copia'' LTR retroelements based on pol reveals two major branches ...etic results reported by both [[Phylogeny:GAGPOL_Ty1/Copia|gag-pol]] and [[Phylogeny:POL_Ty1/Copia|pol]] ''Ty1/Copia'' inferred trees</center>
    22 KB (3,069 words) - 12:02, 29 October 2012
  • Phylogeny:GagPol
    [[Category:Phylogeny]] {{Phylogeny
    6 KB (569 words) - 08:21, 23 December 2020
  • Phylogeny:GPYF LTR retroelements
    [[Category:Phylogeny]] {{Phylogeny
    8 KB (757 words) - 10:37, 27 November 2009
  • Caulimoviridae
    ...results reported by both [[Phylogeny:COATPOL_Caulimovirus|coat-pol]] and [[Phylogeny:POL_Caulimovirus|pol]] ''Caulimoviridae'' inferred trees. </center> ...Petuvirus'', which falls in the deepest position of the ''Caulimoviridae'' phylogeny .
    22 KB (2,954 words) - 10:13, 9 August 2010
  • Ty3/Gypsy
    ...ysis of this family inferred based on both gag and pol polyproteins (see [[Phylogeny:GAGPOL_Ty3/Gypsy|''Ty3/Gypsy'' gag-pol tree]]). The first branch encompasse ...etic results reported by both [[Phylogeny:GAGPOL_Ty3/Gypsy|gag-pol]] and [[Phylogeny:POL_Ty3/Gypsy|pol]] ''Ty3/Gypsy'' inferred trees</center>
    34 KB (4,803 words) - 10:39, 30 April 2010
  • Phylogeny:INT LTR retroelements
    [[Category:Phylogeny]] {{Phylogeny
    12 KB (1,053 words) - 09:42, 3 May 2010
  • Retroelements
    ...to retain introns during transposition, and the distinct placement in the phylogeny of retroelements, suggest that PLEs constitute an ancient class of retroele
    8 KB (1,150 words) - 08:52, 7 July 2010
  • Phylogeny:POL LTR retroelements
    [[Category:Phylogeny]] {{Phylogeny
    13 KB (1,181 words) - 14:04, 1 August 2020
  • Phylogeny:RT LTR retroelements
    [[Category:Phylogeny]] {{Phylogeny
    13 KB (1,179 words) - 11:21, 4 May 2010
  • Phylogeny:RNaseH LTR retroelements
    [[Category:Phylogeny]] {{Phylogeny
    13 KB (1,182 words) - 08:51, 20 August 2010
  • Phylogeny:AP LTR retroelements
    [[Category:Phylogeny]] {{Phylogeny
    14 KB (1,249 words) - 15:23, 17 June 2010
  • Phylogeny:INT GIN/GINGER
    [[Category:Phylogeny]] {{Phylogeny
    24 KB (2,624 words) - 08:44, 9 November 2011
  • The Gypsy Database:Privacy policy
    ...rotein domains encoded by all mobile genetic elements classified to create phylogeny-based Hidden Markov Models (HMM) Profiles.
    17 KB (2,670 words) - 15:07, 26 May 2009
  • Phylogeny: AP clan AA aspartic peptidases
    {{Phylogeny
    26 KB (3,400 words) - 16:38, 19 November 2009
Retrieved from "https://gydb.org/index.php?title=Special:Search"


Welcome to the Gypsy Database (GyDB) an open editable database about the evolutionary relationship of viruses, mobile genetic elements (MGEs) and the genomic repeats where we invite all authors to contribute with their knowledge to improve and expand the topics.
Cite this project:

Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J. Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., LaTorre, A., Moya, A. (2011) The Gypsy Database (GyDB) of Mobile Genetic Elements: Release 2.0 Nucleic Acids Research (NARESE) 39 (suppl 1): D70-D74 doi: 10.1093/nar/gkq1061

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