Phylogeny:POL Caulimoviridae

From The Gypsy Database

BSGFVBSVAVKTSVBSOLVBSMyVCLNVComYMVDrMVTaBVBsCVBVDBVCYMVCSSVScBIMVRTBVCSVMVTVCVPVCVBRRVCmYLCVSbCMVPCSVRuFDVSVBVEVCVCaMVLLDAVCERVFMVMiMVPOL caulimovirus.png

Method of phylogenenetic reconstruction

Phylogenetic reconstruction inferred based on the concatenated proteins product encoded by the pol internal region of the Caulimoviridae family using MEGA 4.1 (Kumar et al. 2008) and the Neighbor joining (NJ) method of phylogenetic reconstruction (Saitou and Nei 1987) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.

 

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