Difference between revisions of "MediaWiki:Sidebar"

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** https://gydb.org/images/3/3f/Genome.zip|Genome Seq. DB
 
** https://gydb.org/images/3/3f/Genome.zip|Genome Seq. DB
 
** https://gydb.org/images/9/94/LTRs_and_TIRs.zip|LTRs and TIRs Seq. DB
 
** https://gydb.org/images/9/94/LTRs_and_TIRs.zip|LTRs and TIRs Seq. DB
* TOOLS
 
** https://gydb.org/index.php/Checkalign_sequence_logos|CheckAlign 2
 
 
* DOMAINS
 
* DOMAINS
 
** LTRs|LTRs
 
** LTRs|LTRs

Revision as of 20:17, 14 January 2021

  • SEARCH
  • Main
    • Intro|Intro
  • SUPERFAMILIES
    • Retroelements|Retroelements
  • SYSTEMS
    • LTR Retroelements|LTR Retroelements
    • GIN/GINGER TRs and INTs|GIN/GINGER TRs and INTs
  • FAMILIES
    • Ty3_Gypsy|Ty3/Gypsy
    • Retroviridae|Retroviridae
    • Bel/Pao|Bel/Pao
    • Caulimoviridae|Caulimoviridae
    • Ty1/Copia|Ty1/Copia
    • GINA|GINA
    • GINGER1|GINGER1
    • GINGER2|GINGER2
    • GINNY|GINNY
    • GINO|GINO
    • IS3/IS481-like|IS3/IS481-like
    • TDD|TDD
    • CIN-1|CIN-1
  • CLASSIFIED ELEMENTS
    • Elements|Elements
  • RELATED FAMILIES
    • Clan_AA|Clan AA
    • GIN-1|GIN-1
    • Eukaryotic chromodomains|Chromodomains
  • TREES AND NETWORKS
    • Phylogeny:POL_LTR_retroelements|Phylogenetic trees
    • Caard|CAARD
  • GyDB COLLECTION
    • Collection alignments|Multiple alignments
    • Collection HMM|HMM Profiles
    • Collection MRC|MRC sequences
  • REFSEQ DATABASES
  • DOMAINS
    • LTRs|LTRs
    • Gag|Gag
    • Protease|Protease
    • Reverse_Transcriptase|Reverse Transcriptase
    • Ribonuclease_H|Ribonuclease H
    • Integrase|Integrase
    • Envelope|Envelope
    • LTR retroelement chromodomains|Retro-chromodomains
    • dUTPase|dUTPase
    • Accessory_Genes|Accessory genes
    • Aphid transmission factor|Aphid trans factor
    • Movement protein|Movement protein
    • Virus associated protein|Virus assoc protein
    • Inclusion body matrix protein|IBM protein
  • ALIGNMENTS & HMMs
  • FORMER VERSION



Welcome to the Gypsy Database (GyDB) an open editable database about the evolutionary relationship of viruses, mobile genetic elements (MGEs) and the genomic repeats where we invite all authors to contribute with their knowledge to improve and expand the topics.
Cite this project:

Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J. Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., LaTorre, A., Moya, A. (2011) The Gypsy Database (GyDB) of Mobile Genetic Elements: Release 2.0 Nucleic Acids Research (NARESE) 39 (suppl 1): D70-D74 doi: 10.1093/nar/gkq1061

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