Phylogeny:POL Bel/Pao

From The Gypsy Database

MabelTasCer7Cer10-1Hydra3-1SpirobelMooseTribelNabelRooMaxBelPurbelSuzuGabelSinbadSaci-6KobelZebelTamyCubelPaoNinjaPOL bel pao.png

Method of phylogenenetic reconstruction

Phylogenetic reconstruction inferred based on the concatenated proteins product encoded by the pol internal region of the Bel/Pao LTR retroelement family using MEGA 4.1 (Kumar et al. 2008) and the Neighbor joining (NJ) method of phylogenetic reconstruction (Saitou and Nei 1987) with 100 bootstrap replicates under the conditions: uniform rates among sites and pairwise deletion of gaps.


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